Lyme – a challenging disease to diagnose

Lyme disease is an infectious disease caused by Borrelia bacteria transmitted by tick bites from ticks of the Ixodes genus. Particularly if untreated, serious and long-term symptoms can occur such as neurological problems, facial palsy, lower limb impairment, heart complications, arthritis, encephalomyelitis and psychosis. It is estimated to affect 300,000 people per year in North America and 65,000 in Europe. Transmission can occur across the placenta during pregnancy.

The causative agent of Lyme disease is a group of bacteria called Borrelia burgdorferi sensu lato. The group comprises 21 closely related species but only 4 of them clearly cause Lyme disease:

  • B. mayonii
  • B. burgdorferi sensu stricto
  • B. afzelii
  • B. garinii

The incubation period for Lyme is usually 1 to 2 weeks but can be longer or shorter. Most of those infected did not realise they had been bitten by a tick as the causative ticks are very small in the nymphal stage.

You didn’t want to see a picture of a tick, did you?

Some people infected with Lyme develop a distinctive bullseye-shaped rash known as erythema migrans. These are perhaps the lucky ones as the presence of it aids Lyme diagnosis. However, the rash commonly fails to conform to the notion of what it is supposed to look like and this can result in Lyme being misdiagnosed as spider bites, cellulitis or shingles. The rash can even be absent entirely and this makes it particularly challenging to diagnose since the other early symptoms of Lyme disease (fever, fatigue, etc.) are ones which are also common to a multitude of other ailments.

The classic Lyme erythema migrans rash

Aside from the rash, Lyme diagnosis typically looks for the patient’s immune response. Anti-Lyme IgM antibodies can usually be detected at 2-4 weeks post-infection, while Anti-Lyme IgG antibodies are usually present 4-6 weeks post-infection. IgM antibodies diminish approximately 4-6 months after infection while IgG antibodies can persist for years. Confusing the issue, the IgM antibodies can persist for years in some individuals and Lyme IgG may never be produced in some “seronegative” individuals. A seronegative patient who doesn’t get the classic rash – that’s going to be difficult to diagnose.

The reason for IgM antibodies being present in chronic patients could be the bacterium reactivating and producing novel proteins, recognisable to the immune system, due to genome instability in the bacterium. The host’s immune system therefore may recognise the altered bacterium as a new one it hasn’t encountered before and develop IgM antibodies against it.

The US Centers for Disease Control recommends a two-tier protocol – first test with ELISA or Immunofluorescence Assay to detect anti-Lyme antibodies, and if it is positive or equivocal, a Western Blot should be performed, also detecting anti-Lyme antibodies. Since Lyme disease is caused by numerous strains of bacterial species with inherent genome instability, the Western Blot test looks for antibodies raised by the patient against a large number of host proteins. Multiple bands should be present for the test to be considered positive.

Lyme Western Blot result annotated with protein bands and molecular weights










False positives are rare although possible where anti-Lyme antibodies cross-react with other bacterial antigens present in the patient sample, but false negatives are common particularly early in testing, partly because the anti-Lyme antibodies take some time to develop following the infection.

PCR is not particularly useful for Lyme diagnosis because of low sensitivity in certain sample types and a poor ability to detect Borrelia DNA in patients with neuroborreliosis.

If test sensitivity is the ability to correctly identify those with a disease and test specificity is the ability to correctly identify those without the disease, Lyme tests sadly still have some way to go to reach 100% for either metric.


Bulk Lyme IgM plasma is available from Logical Biological.

Congratulations! Anyone reading this far qualifies for extra reading.

Extra Reading: The Accuracy of Diagnostic Tests for Lyme Disease in Humans, A Systematic Review and Meta-Analysis of North American Research.
Waddell. L. et al. PLoS One. 2016, 11 (12).